Djordjevic Magdalena R,Ilic Bojana N,Djordjevic Marko J (2026) Cone-dependent jet collisional energy loss in finite QCD medium, PHYSICS LETTERS B, vol. 878, br. , str. - (Article) 

Markovic Sofija,Djordjevic Magdalena R,Ou Hong-Yu,Djordjevic Marko J (2025) Bistability in type I toxin-antitoxin systems may lead to stress-induced persister formation, NPJ SYSTEMS BIOLOGY AND APPLICATIONS, vol. 12, br. 1, str. - (Article) 

Djordjevic Magdalena R,Zivkovic Lidija M,Ou Hong Yu,Djordjevic Marko J (2025) Nonlinear regulatory dynamics of bacterial restriction-modification systems modulates horizontal gene transfer susceptibility, NUCLEIC ACIDS RESEARCH, vol. 53, br. 2, str. - (Article) 

Karmakar Bithika,Zigic Dusan,Djordjevic Magdalena R,Huovinen Pasi,Djordjevic Marko J,Auvinen Jussi (2024) Probing the shape of the quark-gluon plasma droplet via event-by-event quark-gluon plasma tomography, PHYSICAL REVIEW C, vol. 110, br. 4, str. - (Article) 

Ilic Bojana N,Salom Igor,Djordjevic Marko J,Djordjevic Magdalena R (2023) An analytical framework for understanding infection progression under social mitigation measures, NONLINEAR DYNAMICS, vol. 111, br. 23, str. 22033-22053 (Article) 

Karmakar Bithika,Zigic Dusan,Salom Igor,Djordjevic Magdalena R,Auvinen Jussi,Huovinen Pasi,Djordjevic Marko J (2023) Constraining η/s through high-p⊥ theory and data, PHYSICAL REVIEW C, vol. 108, br. 4, str. - (Article) 

Ilic Bojana N,Salom Igor,Djordjevic Marko J,Djordjevic Magdalena R (2023) An analytical framework for understanding infection progression under social mitigation measures, NONLINEAR DYNAMICS, vol. 111, br. 23, str. 22033-22053 (Article) 

Tumbas Marko,Markovic Sofija,Salom Igor,Djordjevic Marko J (2023) A large-scale machine learning study of sociodemographic factors contributing to COVID-19 severity, FRONTIERS IN BIG DATA, vol. 6, br. , str. - (Article) 

Li Peifei,Goh Ying-Xian,Ilic Bojana N,Tai Cui,Deng Zixin,Chen Zhaoyan,Djordjevic Marko J,Ou Hong-Yu (2023) Antibiotic-induced degradation of antitoxin enhances the transcription of acetyltransferase-type toxin-antitoxin operon, JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, vol. 78, br. 4, str. 1066-1075 (Article) 

Zhang Jianfeng,Guan Jiahao,Wang Meng,Li Gang,Djordjevic Marko J,Tai Cui,Wang Hui,Deng Zixin,Chen Zhaoyan,Ou Hong-Yu (2023) SecReT6 update: a comprehensive resource of bacterial Type VI Secretion Systems, SCIENCE CHINA-LIFE SCIENCES, vol. 66, br. 3, str. 626-634 (Article) 

Djordjevic Marko J,Markovic Sofija,Salom Igor,Djordjevic Magdalena R (2023) Understanding risk factors of a new variant outburst through global analysis of Omicron transmissibility, ENVIRONMENTAL RESEARCH, vol. 216, br. , str. - (Article) 

Markovic Sofija,Salom Igor,Rodic Andjela M,Djordjevic Marko J (2022) Analyzing the GHSI puzzle of whether highly developed countries fared worse in COVID-19, SCIENTIFIC REPORTS, vol. 12, br. 1, str. - (Article) 

Goh Ying-Xian,Li Peifei,Wang Meng,Djordjevic Marko J,Tai Cui,Wang Hui,Deng Zixin,Chen Zhaoyan,Ou Hong-Yu (2022) Comparative Analysis of Diverse Acetyltransferase-Type Toxin-Antitoxin Loci in Klebsiella pneumoniae, MICROBIOLOGY SPECTRUM, vol. 10, br. 4, str. - (Article) 

Stojku Stefan,Auvinen Jussi,Djordjevic Marko J,Huovinen Pasi,Djordjevic Magdalena R (2022) Early evolution constrained by high-p perpendicular to quark-gluon plasma tomography, PHYSICAL REVIEW C, vol. 105, br. 2, str. - (Article) 

Ilic Bojana N,Zigic Dusan,Djordjevic Marko J,Djordjevic Magdalena R (2021) Utilizing high-p(perpendicular to) theory and data to constrain the initial stages of quark-gluon plasma, INTERNATIONAL JOURNAL OF MODERN PHYSICS E, vol. 30, br. 11, str. - (Article) 

Markovic Sofija,Rodic Andjela M,Salom Igor,Milicevic Ognjen S,Djordjevic Magdalena R,Djordjevic Marko J (2021) COVID-19 severity determinants inferred through ecological and epidemiological modeling, ONE HEALTH, vol. 13, br. , str. - (Article) 

Milicevic Ognjen S,Salom Igor,Rodic Andjela M,Markovic Sofija,Tumbas Marko,Zigic Dusan,Djordjevic Magdalena R,Djordjevic Marko J (2021) PM2.5 as a major predictor of COVID-19 basic reproduction number in the USA, ENVIRONMENTAL RESEARCH, vol. 201, br. , str. - (Article) 

Djordjevic Marko J,Salom Igor,Markovic Sofija,Rodic Andjela M,Milicevic Ognjen S,Djordjevic Magdalena R (2021) Inferring the Main Drivers of SARS-CoV-2 Global Transmissibility by Feature Selection Methods, GEOHEALTH, vol. 5, br. 9, str. - (Article) 

Djordjevic Magdalena R,Djordjevic Marko J,Ilic Bojana N,Stojku Stefan,Salom Igor (2021) Understanding Infection Progression under Strong Control Measures through Universal COVID-19 Growth Signatures, GLOBAL CHALLENGES, vol. 5, br. 5, str. - (Article) 

Stojku Stefan,Ilic Bojana N,Djordjevic Marko J,Djordjevic Magdalena R (2021) Extracting the temperature dependence in high-p(perpendicular to) particle energy loss, PHYSICAL REVIEW C, vol. 103, br. 2, str. - (Article) 

Salom Igor,Rodic Andjela M,Milicevic Ognjen S,Zigic Dusan,Djordjevic Magdalena R,Djordjevic Marko J (2021) Effects of Demographic and Weather Parameters on COVID-19 Basic Reproduction Number, FRONTIERS IN ECOLOGY AND EVOLUTION, vol. 8, br. , str. - (Article) 

Djordjevic Magdalena R,Stojku Stefan,Zigic Dusan,Ilic Bojana N,Auvinen Jussi,Salom Igor,Djordjevic Marko J,Huovinen Pasi (2021) From high p(perpendicular to) theory and data to inferring anisotropy of Quark-Gluon Plasma, NUCLEAR PHYSICS A, vol. 1005, br. , str. - (Article; Proceedings Paper) 

Zigic Dusan,Ilic Bojana N,Djordjevic Marko J,Djordjevic Magdalena R (2020) Exploring the initial stages in heavy-ion collisions with high-p(perpendicular to) theory and data, PHYSICAL REVIEW C, vol. 101, br. 6, str. - (Article) 

Djordjevic Magdalena R,Stojku Stefan,Djordjevic Marko J,Huovinen Pasi (2019) Shape of the quark gluon plasma droplet reflected in the high-p(perpendicular to) data, PHYSICAL REVIEW C, vol. 100, br. 3, str. - (Article) 

Milicevic Ognjen S,Repac Jelena,Bozic Bojan Dj,Djordjevic Magdalena R,Djordjevic Marko J (2019) A Simple Criterion for Inferring CRISPR Array Direction, FRONTIERS IN MICROBIOLOGY, vol. 10, br. , str. - (Article) 

Djordjevic Marko J,Rodic Andjela M,Graovac Stefan (2019) From biophysics to "omics and systems biology, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, vol. 48, br. 5, str. 413-424 (Review) 

Zigic Dusan,Salom Igor,Auvinen Jussi,Djordjevic Marko J,Djordjevic Magdalena R (2019) DREENA-C framework: joint R(AA )and v(2) predictions and implications to QGP tomography, JOURNAL OF PHYSICS G-NUCLEAR AND PARTICLE PHYSICS, vol. 46, br. 8, str. - (Article) 

Djordjevic Magdalena R,Zigic Dusan,Djordjevic Marko J,Auvinen Jussi (2019) How to test path-length dependence in energy-loss mechanisms: Analysis leading to a new observable, PHYSICAL REVIEW C, vol. 99, br. 6, str. - (Article) 

Zigic Dusan,Salom Igor,Auvinen Jussi,Djordjevic Marko J,Djordjevic Magdalena R (2019) DREENA-B framework: First predictions of R-AA and v(2) within dynamical energy loss formalism in evolving QCD medium, PHYSICS LETTERS B, vol. 791, br. , str. 236-241 (Article) 

Bozic Bojan Dj,Repac Jelena,Djordjevic Marko J (2019) Endogenous Gene Regulation as a Predicted Main Function of Type I-E CRISPR/Cas System in E. coli, MOLECULES, vol. 24, br. 4, str. - (Article) 

Blagojevic Bojana N,Djordjevic Magdalena R,Djordjevic Marko J (2019) Calculating hard probe radiative energy loss beyond the soft-gluon approximation: Examining the approximation validity, PHYSICAL REVIEW C, vol. 99, br. 2, str. - (Article) 

Djordjevic Magdalena R,Zigic Dusan,Blagojevic Bojana N,Auvinen Jussi,Salom Igor,Djordjevic Marko J (2019) Dynamical energy loss formalism: from describing suppression patterns to implications for future experiments, NUCLEAR PHYSICS A, vol. 982, br. , str. 699-702 (Article; Proceedings Paper) 

Graovac Stefan,Rodic Andjela M,Djordjevic Magdalena R,Severinov Konstantin,Djordjevic Marko J (2019) Effects of Population Dynamics on Establishment of a Restriction-Modification System in a Bacterial Host, MOLECULES, vol. 24, br. 1, str. - (Article) 

Klimuk Evgeny,Bogdanova Ekaterina,Nagornykh Max,Rodic Andjela M,Djordjevic Marko J,Medvedeva Sofia,Pavlova Olga,Severinov Konstantin (2018) Controller protein of restriction-modification system Kpn2I affects transcription of its gene by acting as a transcription elongation roadblock, NUCLEIC ACIDS RESEARCH, vol. 46, br. 20, str. 10810-10826 (Article) 

Musharova Olga,Vyhovskyi Danylo,Medvedeva Sofia,Guzina Jelena,Zhitnyuk Yulia,Djordjevic Marko J,Severinov Konstantin,Savitskaya Ekaterina (2018) Avoidance of Trinucleotide Corresponding to Consensus Protospacer Adjacent Motif Controls the Efficiency of Prespacer Selection during Primed Adaptation, MBIO, vol. 9, br. 6, str. - (Article) 

Guzina Jelena,Chen Wei-Hua,Stankovic Tamara,Djordjevic Magdalena R,Zdobnov Evgeny,Djordjevic Marko J (2018) In silico Analysis Suggests Common Appearance of scaRNAs in Type II Systems and Their Association With Bacterial Virulence, FRONTIERS IN GENETICS, vol. 9, br. , str. - (Article) 

Djordjevic Marko J,Djordjevic Magdalena R,Zdobnov Evgeny (2017) Scoring Targets of Transcription in Bacteria Rather than Focusing on Individual Binding Sites, FRONTIERS IN MICROBIOLOGY, vol. 8, br. , str. - (Article) 

Rodic Andjela M,Blagojevic Bojana N,Djordjevic Magdalena R,Severinov Konstantin,Djordjevic Marko J (2017) Features of CRISPR-Cas Regulation Key to Highly Efficient and Temporally-Specific crRNA Production, FRONTIERS IN MICROBIOLOGY, vol. 8, br. , str. - (Article) 

Rodic Andjela M,Blagojevic Bojana N,Zdobnov Evgeny,Djordjevic Magdalena R,Djordjevic Marko J (2017) Understanding key features of bacterial restriction-modification systems through quantitative modeling, BMC SYSTEMS BIOLOGY, vol. 11, br. , str. - (Article) 

Guzina Jelena,Djordjevic Marko J (2017) Mix-and-matching as a promoter recognition mechanism by ECF sigma factors, BMC EVOLUTIONARY BIOLOGY, vol. 17, br. , str. - (Article) 

Nikolic Milos,Stankovic Tamara,Djordjevic Marko J (2017) Contribution of bacterial promoter elements to transcription start site detection accuracy, JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, vol. 15, br. 2, str. - (Article; Proceedings Paper) 

Guzina Jelena,Djordjevic Marko J (2016) Promoter Recognition by Extracytoplasmic Function sigma Factors: Analyzing DNA and Protein Interaction Motifs, JOURNAL OF BACTERIOLOGY, vol. 198, br. 14, str. 1927-1938 (Article) 

Morozova Natalia,Sabantsev Anton,Bogdanova Ekaterina,Fedorova Yana,Maikova Anna,Vedyaykin Alexey,Rodic Andjela M,Djordjevic Marko J,Khodorkovskii Mikhail,Severinov Konstantin (2016) Temporal dynamics of methyltransferase and restriction endonuclease accumulation in individual cells after introducing a restriction-modification system, NUCLEIC ACIDS RESEARCH, vol. 44, br. 2, str. 790-800 (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2015) Predictions of heavy-flavor suppression at 5.1 TeV Pb+Pb collisions at the CERN Large Hadron Collider, PHYSICAL REVIEW C, vol. 92, br. 2, str. - (Article) 

Guzina Jelena,Djordjevic Marko J (2015) Inferring bacteriophage infection strategies from genome sequence: analysis of bacteriophage 7-11 and related phages, BMC EVOLUTIONARY BIOLOGY, vol. 15, br. , str. - (Article) 

Zukher Inna,Novikova Maria,Tikhonov Anton,Nesterchuk Mikhail V,Osterman Ilya A,Djordjevic Marko J,Sergiev Petr V,Sharma Cynthia M,Severinov Konstantin (2014) Ribosome-controlled transcription termination is essential for the production of antibiotic microcin C, NUCLEIC ACIDS RESEARCH, vol. 42, br. 19, str. 11891-11902 (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2014) Heavy flavor puzzle from data measured at the BNL Relativistic Heavy Ion Collider: Analysis of the underlying effects, PHYSICAL REVIEW C, vol. 90, br. 3, str. - (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2014) Understanding the unexpected suppression patterns at RHIC and LHC, MODERN PHYSICS LETTERS A, vol. 29, br. 31, str. - (Review) 

Djordjevic Magdalena R,Djordjevic Marko J,Blagojevic Bojana N (2014) RHIC and LHC jet suppression in non-central collisions, PHYSICS LETTERS B, vol. 737, br. , str. 298-302 (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2014) LHC jet suppression of light and heavy flavor observables, PHYSICS LETTERS B, vol. 734, br. , str. 286-289 (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2014) Explaining the fine hierarchy in pion and kaon suppression at LHC: importance of fragmentation functions, JOURNAL OF PHYSICS G-NUCLEAR AND PARTICLE PHYSICS, vol. 41, br. 5, str. - (Article) 

Djordjevic Marko J (2013) Modeling bacterial immune systems: Strategies for expression of toxic - but useful - molecules, BIOSYSTEMS, vol. 112, br. 2, str. 139-144 (Article) 

Djordjevic Marko J (2013) Efficient transcription initiation in bacteria: an interplay of protein-DNA interaction parameters, INTEGRATIVE BIOLOGY, vol. 5, br. 5, str. 796-806 (Article) 

Djordjevic Marko J,Djordjevic Magdalena R,Severinov Konstantin (2012) CRISPR transcript processing: a mechanism for generating a large number of small interfering RNAs, BIOLOGY DIRECT, vol. 7, br. , str. - (Article) 

Djordjevic Marko J,Djordjevic Magdalena R (2012) A simple biosynthetic pathway for large product generation from small substrate amounts, PHYSICAL BIOLOGY, vol. 9, br. 5, str. - (Article) 

Djordjevic Magdalena R,Djordjevic Marko J (2012) Generalization of radiative jet energy loss to non-zero magnetic mass, PHYSICS LETTERS B, vol. 709, br. 3, str. 229-233 (Article) 

Pavlova Olga,Lavysh Dania,Klimuk Evgeny,Djordjevic Marko J,Liavcheev Dmitry A,Gelfand Mikhail S,Severinov Konstantin,Akulenko Natalja (2012) Temporal Regulation of Gene Expression of the Escherichia coli Bacteriophage phiEco32, JOURNAL OF MOLECULAR BIOLOGY, vol. 416, br. 3, str. 389-399 (Article) 

Djordjevic Marko J (2011) Redefining Escherichia coli sigma(70) Promoter Elements: -15 Motif as a Complement of the -10 Motif, JOURNAL OF BACTERIOLOGY, vol. 193, br. 22, str. 6305-6314 (Article)